BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F06SP1|AL426244
(769 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1772 1505 0.0
>3x_Contig1772
Length = 25851
Score = 1505 bits (758), Expect = 0.0
Identities = 767/770 (99%), Gaps = 1/770 (0%)
Strand = Plus / Minus
Query: 1 actccgcatcattttgatatttcccgtcaagg-tctttttgtaatgatagaaacagcgag 59
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 24360 actccgcatcattttgatatttcccgtcaagggtctttttgtaatgatagaaacagcgag 24301
Query: 60 ccgttgcccgagtaacaacaccaacacggcccaaagtcaagtatatgtgcctagtgaaat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24300 ccgttgcccgagtaacaacaccaacacggcccaaagtcaagtatatgtgcctagtgaaat 24241
Query: 120 catggaaagtatcgttagtgttatagaaagccacaccagtacctgccaaaccgaatgcaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24240 catggaaagtatcgttagtgttatagaaagccacaccagtacctgccaaaccgaatgcaa 24181
Query: 180 catatttccaatttattaacctctttttcggaaccgaagttgtgtcagaaaagaacctct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24180 catatttccaatttattaacctctttttcggaaccgaagttgtgtcagaaaagaacctct 24121
Query: 240 gttgcctcaaagtccttataaaaaggtggctcgagaaaggtcgcgtccgcacaatatttc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24120 gttgcctcaaagtccttataaaaaggtggctcgagaaaggtcgcgtccgcacaatatttc 24061
Query: 300 tagtaagcattggtcaacatatgcaagccggatgctctttagactcggttcttacatgaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24060 tagtaagcattggtcaacatatgcaagccggatgctctttagactcggttcttacatgaa 24001
Query: 360 tatgtagagtttggtagcgtttttgacaaatcttaccaaccatatataacaaacaaaaac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24000 tatgtagagtttggtagcgtttttgacaaatcttaccaaccatatataacaaacaaaaac 23941
Query: 420 cctgtgaaaaattcagtttcctaagcatagaggaattttgaatgctaacggtgataactt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23940 cctgtgaaaaattcagtttcctaagcatagaggaattttgaatgctaacggtgataactt 23881
Query: 480 tggtgacataacaaatgatcaacagaactgttgaracccccgagctttaaactgatgctg 539
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 23880 tggtgacataacaaatgatcaacagaactgttgaaacccccgagctttaaactgatgctg 23821
Query: 540 caagcgttaggctttgacgataaatagttctttttcgaaatacatttttgtctatatgta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23820 caagcgttaggctttgacgataaatagttctttttcgaaatacatttttgtctatatgta 23761
Query: 600 tatrttcatcttcatctattcaggaaccggtgggaagttcacaggtactttcttgtcact 659
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23760 tatattcatcttcatctattcaggaaccggtgggaagttcacaggtactttcttgtcact 23701
Query: 660 tggagaaatagaattcttgaaagataggaaagcattccaaaatatggatattatattgac 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23700 tggagaaatagaattcttgaaagataggaaagcattccaaaatatggatattatattgac 23641
Query: 720 ggagaagagcctatgatgcactggtaccaatgaaaagttaattagttgga 769
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23640 ggagaagagcctatgatgcactggtaccaatgaaaagttaattagttgga 23591
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6087
Number of Sequences: 1807
Number of extensions: 6087
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 769
length of database: 10,358,551
effective HSP length: 16
effective length of query: 753
effective length of database: 10,329,639
effective search space: 7778218167
effective search space used: 7778218167
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)